SECURITIES AND EXCHANGE COMMISSION
Washington, D.C.  20549

FORM 8-K

CURRENT REPORT
PURSUANT TO SECTION 13 OR 15(d) OF THE
SECURITIES EXCHANGE ACT OF 1934

Date of report (Date of earliest event reported):  May 4, 2018

IONIS PHARMACEUTICALS, INC.
(Exact Name of Registrant as Specified in Charter)

Delaware
(State or Other Jurisdiction of Incorporation)

000-19125
 
33-0336973
(Commission File No.)
 
(IRS Employer Identification No.)

2855 Gazelle Court
Carlsbad, CA 92010
(Address of Principal Executive Offices and Zip Code)

Registrant’s telephone number, including area code: (760) 931-9200
 

Check the appropriate box below if the Form 8-K filing is intended to simultaneously satisfy the filing obligation of the registrant under any of the following provisions:
 
Written communications pursuant to Rule 425 under the Securities Act (17 CFR 230.425)

Soliciting material pursuant to Rule 14a-12 under the Exchange Act (17 CFR 240.14a-12)

Pre-commencement communications pursuant to Rule 14d-2(b) under the Exchange Act (17 CFR 240.14d-2(b))

Pre-commencement communications pursuant to Rule 13e-4(c) under the Exchange Act (17 CFR 240.13e-4(c))
 
Indicate by check mark whether the registrant is an emerging growth company as defined in Rule 405 of the Securities Act of 1933 (Section 230.405 of this chapter) or Rule 12b-2 of the Securities Exchange Act of 1934 (Section 240.12b-2 of this chapter).
 
Emerging growth company          ☐
 
If an emerging growth company, indicate by check mark if the registrant has elected not to use the extended transition period for complying with any new or revised financial accounting standards provided pursuant to Section 13(a) of the Exchange Act.           ☐
 


Item 2.02
Results of Operations and Financial Condition.

On May 4, 2018, Ionis Pharmaceuticals, Inc. (the “Company”) issued a press release announcing the Company’s financial results for the quarter ended March 31, 2018.  In addition to disclosing results that are determined in accordance with Generally Accepted Accounting Principles (GAAP), the Company also discloses pro forma or non-GAAP results of operations, which are adjusted from GAAP to exclude non-cash compensation related to stock awards.  The Company is presenting pro forma information excluding non-cash compensation because the Company believes it is useful for investors in assessing the Company’s operating results compared to the prior year.  A copy of the release is furnished with this report as an exhibit pursuant to “Item 2.02. Results of Operations and Financial Condition” of Form 8-K in accordance with SEC Release Nos. 33-8216 and 34-47583.

The information in this Current Report on Form 8-K and the Exhibit attached hereto shall not be deemed “filed” for purposes of Section 18 of the Securities Exchange Act of 1934 (the “Exchange Act”) or otherwise subject to the liabilities of that section, nor shall it be deemed incorporated by reference in any filing under the Securities Act of 1933 or the Exchange Act, regardless of any general incorporation language in such filing.

Item 8.01
Other Events.

The U.S. Food and Drug Administration has extended the review period for TEGSEDITM (inotersen) and has assigned a new prescription drug user fee act, or PDUFA, date of October 6, 2018.

Item 9.01.
Financial Statements and Exhibits.

(d) Exhibits

 
99.1
Press Release dated May 4, 2018.
 

SIGNATURE

Pursuant to the requirements of the Securities Exchange Act of 1934, as amended, the registrant has duly caused this report to be signed on its behalf by the undersigned, thereunto duly authorized.

 
Ionis Pharmaceuticals, Inc.
     
Dated:  May 4, 2018
By:
/s/ Patrick R. O’Neil
   
Patrick R. O’Neil
   
Senior Vice President, Legal, General Counsel and Chief Compliance Officer
 

INDEX TO EXHIBITS
 
Press Release dated May 4, 2018.

 


Exhibit 99.1
 

Ionis Reports First Quarter 2018 Financial Results

Total revenues increased by 25%, driven by SPINRAZA royalties

More than $2 billion of cash expected upon closing of Biogen transaction

Expanded strategic neurology research collaboration with Biogen and invested in TEGSEDI™ commercialization through Akcea

Conference call and webcast today, May 4, 2018, at 11:30 a.m. Eastern Time
 
CARLSBAD, Calif., May 4, 2018 – Ionis Pharmaceuticals, Inc. (Nasdaq: IONS) today reported financial results for the first quarter of 2018 and highlighted its recent business and pipeline successes.

“We have successfully executed our commercialization strategy through the expansion of our strategic relationship with Biogen in neurological diseases and our commercialization of inotersen through our affiliate, Akcea. Our strategy is to create tailored commercial solutions for each of our drugs with the aim to maximize the commercial value of the drug and optimize our financial participation in this value. As our most recent collaboration with Biogen demonstrates, we have substantially increased the value of our antisense technology platform in neurological diseases over the last several years. The economics we achieved with our Bayer and Novartis partnerships show that we have done the same in multiple other therapeutic areas,” said Stanley T. Crooke, M.D., Ph.D., chairman of the board and chief executive officer. “Looking ahead, we are focused on launching TEGSEDI this year, assuming approval.  As Akcea announced yesterday, the FDA decided they needed additional time to review some of our responses to their standard information requests and, therefore, has extended the review period for TEGSEDI. The new PDUFA date is October 6, 2018. We are working closely with the FDA to advance the review of our filing as quickly as possible. This year we also plan to launch WAYLIVRA, assuming approval. The commercialization of these two Ionis drugs will solidify Ionis as a multi-product, profitable company delivering innovative antisense medicines to patients in need.”

First Quarter 2018 Financial Highlights

·
Revenues increased by 25%, driven by SPINRAZA royalties
o
Total revenues were $144 million, compared to $116 million in Q1 2017
o
Commercial revenue from SPINRAZA royalties was $41 million, compared to $5 million in Q1 2017
o
R&D revenue included $60 million in licensing fees for two drugs discovered by Ionis under its collaboration with AstraZeneca
o
Beginning in Q2 2018, Ionis’ R&D revenue will include revenue from the amortization of the $500 million technology access fee and equity premium related to Ionis’ expanded strategic research collaboration with Biogen
 
1

·
GAAP operating and net loss near breakeven; on track for third consecutive year of pro forma operating profitability
o
GAAP operating loss was $3 million in Q1 2018, compared to GAAP operating income of $19 million for the same period in 2017. Pro forma operating income was $25 million in Q1 2018, compared to $40 million for the same period in 2017
o
Operating expenses increased primarily due to higher SG&A expenses as Ionis prepares to commercialize TEGSEDI and WAYLIVRA this year

·
Cash will increase to more than $2 billion, combining Ionis’ first quarter cash balance of more than $1 billion with $1 billion expected upon closing of Ionis’ expanded collaboration with Biogen
o
During Q1 2018, Ionis received more than $155 million in payments from partners

“In the first quarter, we made further progress toward our goal of being a multiproduct, profitable company. We ended the quarter with operating income of $25 million and net income of $27 million, both on a pro forma basis. Our strong first quarter results were driven by a 25% increase in revenue, primarily from substantial SPINRAZA royalties. Completing our seventh consecutive quarter of pro forma operating income keeps us on track for our third consecutive year of proforma operating income even while we prepare to launch two drugs. This strong performance is a direct result of our technology platform delivering high-value drugs combined with our business strategy, which aims to maximize the commercial potential of each of our drugs and optimize our participation in this value,” said Elizabeth L. Hougen, chief financial officer of Ionis. “With the $2 billion in cash we expect to have on the closing of the Biogen transaction, we have the financial strength to invest in opportunities that we believe will increase shareholder value, such as advancing and expanding our portfolio of drugs, retaining our drugs longer, and building a growing pipeline of Ionis-owned drugs that we commercialize ourselves through commercial affiliates.

All pro forma amounts referred to in this press release exclude non-cash compensation expense related to equity awards. Please refer to the reconciliation of pro forma and GAAP measures, which is provided later in this release.

Business Highlights

·
Expanded strategic research collaboration with Biogen for neurological diseases – one of the largest research-stage collaborations ever
o
$1 billion upfront to Ionis, including $625 million to purchase Ionis’ stock at a 25% cash premium of $125 million and a $375 million upfront payment
§
Together, the cash premium and upfront payment represent a $500 million technology access fee
o
Ionis is eligible to receive milestone payments and license fees up to $270 million per drug and royalties up to 20% on net sales
o
Disease areas include dementia, neuromuscular diseases, movement disorders, ophthalmology, diseases of the inner ear, and neuropsychiatry
 
2

·
SPINRAZA ® for SMAone of the most successful orphan disease drug launches in history
o
SPINRAZA®, commercialized by Biogen, continued to generate growth with global revenues of $364 million in Q1 2018
o
Increase of over 25% from last quarter in number of patients on SPINRAZA, including a 16% increase in number of patients treated in the U.S. and a more than 50% increase outside the US
o
Access expanding outside the U.S. with reimbursement in 24 countries; Biogen expects reimbursement in at least seven more countries by the end of 2018
o
Presented data from the SHINE open-label study at the American Academy of Neurology (AAN) annual meeting demonstrating continued benefit, improved motor function and mobility, and longer event-free survival for the most severely affected patients treated with SPINRAZA®
o
Presented data from the NURTURE study at the Muscular Dystrophy Association (MDA) Clinical Conference demonstrating continued benefit in motor function for infants, teens and young adults treated with SPINRAZA®

·
TEGSEDI (inotersen) for hereditary transthyretin amyloidosis (hATTR) – potential to transform the lives of people with hATTR; on-track to launch in 2018
o
Invested in global commercialization of TEGSEDI by licensing TEGSEDI to Ionis’ majority-owned affiliate, Akcea
§
Optimized Ionis’ commercial participation with up to $1.5 billion in milestone payments and a 60% profit share
o
Early access program enrolling in the U.S. and Europe
o
Global commercial organization staffed and focused on disease education; robust patient support program in place; supply chain in place and launch supplies ready to be labeled
o
Presented data from the Phase 3 NEURO-TTR study, the open label extension study and an investigator sponsored Phase 2 study at the International Symposium on Amyloidosis annual meeting and the AAN annual meeting

·
WAYLIVRA (volanesorsen) for FCS and FPL – potential first treatment for people with FCS; global on-track to launch in 2018
o
Early access program enrolling in the U.S. and Europe
o
Global commercial organization staffed and focused on disease education; robust patient support program in place; supply chain in place and launch supplies ready to be labeled
o
Positive scientific opinion to initiate Early Access to Medicines Scheme (EAMS) by the UK’s Medicines and Healthcare Products Regulatory Agency (MHRA), for the treatment of people with FCS.

·
Collaboration with AstraZeneca for Cardiovascular, Renal and Metabolic Diseases
o
Earned $60 million for the license of second and third antisense drugs, IONIS-AZ5-2.5Rx and IONIS-AZ6-2.5-LRx, to treat a genetically associated form of kidney disease and nonalcoholic steatohepatitis (NASH), respectively, to AstraZeneca
o
As IONIS-AZ5-2.5Rx and IONIS-AZ6-2.5-LRx advance, Ionis may receive up to $300 million for each drug in additional development and regulatory milestone payments, as well as tiered royalties on sales of each drug
 
3

Pipeline and Technology Progress
 
·
Presented positive IONIS-HTTRx (RG6042) Phase 1/2 data in people with Huntington’s disease (HD) at the annual CHDI HD conference. IONIS-HTTRx is the first drug in development to lower the disease-causing protein in people with HD
·
Presented data at the AAN annual meeting that demonstrated broad potential of antisense drugs for neurological diseases with 14 presentations on Ionis’ drugs to treat neurological diseases, including SMA, hATTR amyloidosis, Huntington’s disease, Alzheimer’s disease, and ALS
o
Presented additional data from the Phase 1/2 study of IONIS-HTTRx that demonstrated correlations between reductions in mutant huntingtin (mHTT) and improvements in clinical measures of HD
·
Published review paper titled, “RNA-targeted Therapeutics” in Cell Metabolism, authored by Stanley Crooke, M.D., Ph.D.; highlights antisense and other RNA-targeting therapeutics as important platforms for drug discovery across multiple diseases

“This year, we plan to launch two new promising drugs for rare diseases, TEGSEDI and WAYLIVRA. We look forward to adding commercial revenue from these drugs, assuming approval, to our growing revenue from SPINRAZA,” said Brett P. Monia, Ph.D., chief operating officer and senior vice president of antisense drug discovery and translational medicine at Ionis Pharmaceuticals. “Our next set of commercial opportunities are on the horizon.  We have multiple drugs that we or our partners plan to advance into pivotal studies in the next year or so, including IONIS-HTTRx for patients with Huntington’s disease, IONIS-STAT3-2.5Rx for patients with head and neck cancer and AKCEA-APO(a)-LRx in patients with high Lp(a) and risk of cardiovascular disease. Following closely behind these are drugs for rare diseases that have the potential to move quickly toward the market, including IONIS-GHR-LRx for patients with acromegaly and IONIS-TMPRSS6-LRx for patients with beta thalassemia.”

Expected Events Through 2018
 
·
Launch of TEGSEDI for people with hATTR, assuming approval
·
Launch of WAYLIVRA for people with FCS, assuming approval
·
Report results from six Phase 2 programs, including data from a study with AKCEA-APO(a)-LRx in people with high Lp(a) and AKCEA-ANGPTL3-LRx for people with rare hyperlipidemias
·
Initiate up to nine new clinical studies, including a clinical study of AKCEA-TTR-LRx for hereditary and wild-type forms of ATTR

The recent Biogen transaction is subject to customary closing conditions, including the expiration of the applicable waiting period under the Hart Scott Rodino Antitrust Improvements Act of 1976 in the United States. Biogen and Ionis expect the deal to close in the second quarter of 2018.

Revenue
 
At the beginning of 2018, Ionis adopted the new revenue recognition accounting standard on a retrospective basis. Starting with Ionis’ first quarter, all periods presented are shown using the new standard.  Ionis has labeled its prior period financial statements “as revised” to indicate the change required under the accounting rules. Whenever Ionis refers to prior period results, they reflect the new accounting rules. This change did not have a significant impact on Ionis’ previously reported revenue.
 
4

Ionis’ revenue in the first quarter of 2018 was $144.4 million, compared to $115.8 million for the same period in 2017 and was comprised of the following (amounts in millions):

   
Three months ended,
March 31,
 
   
2018
   
2017
 
Revenue:
     
Commercial revenue:
           
SPINRAZA royalties
 
$
41
   
$
5
 
Licensing and royalty revenue
   
1
     
3
 
Total commercial revenue
   
42
     
8
 
R&D Revenue:
               
License fees
   
62
     
65
 
Milestone payments
   
2
     
3
 
Amortization from:
               
Upfront payments
   
27
     
20
 
Milestone payments
   
5
     
17
 
Other services
   
6
     
3
 
Total R&D revenue
   
102
     
108
 
Total revenue
 
$
144
   
$
116
 

License fees in the first quarter of 2018 were $62 million primarily from AstraZeneca for the license of IONIS-AZ5-2.5Rx and IONIS-AZ6-2.5-LRx. The first quarter of 2017 included $65 million in a license fee from Bayer for the license of IONIS-FXI-LRx.

Operating Expenses

Operating expenses for the first quarter on a GAAP basis were $147.7 million and on a pro forma basis were $119.3 million compared to GAAP operating expenses of $96.3 million and pro forma operating expenses of $75.4 million for the same period in 2017. Operating expenses increased in Q1 2018, compared to 2017, principally due to higher SG&A expenses as Ionis and its affiliate Akcea prepare to commercialize WAYLIVRA and TEGSEDI. The Company’s SG&A expenses also increased in Q1 2018 compared to Q1 2017 because of fees owed under its in-licensing agreements related to SPINRAZA, which increase as the Company’s SPINRAZA revenue increases. R&D expenses accounted for a smaller portion of the increase in operating expenses. R&D expenses increased primarily from medical affairs expenses and manufacturing costs related to TEGSEDI for the planned launch.

Net Income (Loss)
 
Ionis reported a net loss of $10.8 million for the first quarter of 2018, compared to net income of $9.0 million for the same period in 2017, all according to GAAP. On a pro forma basis, Ionis reported net income of $17.6 million for the first quarter of 2018, compared to net income of $29.9 million for the same period in 2017. Ionis’ GAAP net loss increased and its pro forma net income decreased in the first quarter of 2018 primarily due to increased operating expenses as Ionis prepares to commercialize TEGSEDI and WAYLIVRA.
 
5

Net Loss Attributable to Noncontrolling Interest in Akcea Therapeutics, Inc.

Akcea sold shares of its common stock to third parties in its IPO in July 2017. From the closing of the IPO through the end of the first quarter in 2018, Ionis owned 68 percent of Akcea. The shares held by third parties represent an interest in Akcea’s equity that Ionis does not control. However, because Ionis continues to maintain overall control of Akcea through its voting interest, Ionis reflects the assets, liabilities and results of operations of Akcea in Ionis’ consolidated financial statements. Ionis reflects the noncontrolling interest attributable to other holders of Akcea’s common stock in a separate line called “Net loss attributable to noncontrolling interest in Akcea” on Ionis’ statement of operations. Ionis’ net loss attributable to noncontrolling interest in Akcea for the first quarter of 2018 was $9.4 million. Ionis also added a corresponding account in its stockholders’ equity section on its balance sheet called “Noncontrolling interest in Akcea Therapeutics, Inc.”

In April 2018, Ionis received 8 million shares of Akcea stock for the license of TEGSEDI and AKCEA-TTR-LRx to Akcea and purchased an additional 10.7 million shares of Akcea stock for $200 million, increasing Ionis’ ownership percentage to approximately 75 percent. Ionis will reflect this increase in its ownership percentage in the second quarter of 2018.

Net Income (Loss) Attributable to Ionis Common Stockholders

Ionis reported a GAAP net loss attributable to Ionis’ common stockholders of $1.4 million for the first quarter of 2018, compared to GAAP net income of $9.0 million for the same period in 2017. For the first quarter of 2018, basic and diluted net loss per share were $0.01. For the first quarter of 2017, basic and diluted net income per share were $0.07.

Webcast and Conference Call

Today, at 11:30 a.m. Eastern Time, Ionis will conduct a live webcast conference call to discuss this earnings release and related activities. Interested parties may listen to the call by dialing 877-443-5662 or access the webcast at www.ionispharma.com. A webcast replay will be available for a limited time.

About Ionis Pharmaceuticals, Inc.
 
Ionis is the leading company in RNA-targeted drug discovery and development focused on developing drugs for patients who have the highest unmet medical needs, such as those patients with severe and rare diseases. Using its proprietary antisense technology, Ionis has created a large pipeline of first-in-class or best-in-class drugs, with over 45 drugs in development. SPINRAZA® (nusinersen) has been approved in global markets for the treatment of spinal muscular atrophy (SMA). Biogen is responsible for commercializing SPINRAZA. TEGSEDI (inotersen) and WAYLIVRA (volanesorsen) are two antisense drugs that Ionis discovered and successfully advanced through Phase 3 studies.  TEGSEDI is under regulatory review for marketing approval in the U.S., EU and Canada for the treatment of patients with hereditary ATTR amyloidosis. WAYLIVRA is under regulatory review for marketing approval in the U.S., EU and Canada for the treatment of patients with familial chylomicronemia syndrome, or FCS. WAYLIVRA is also in a Phase 3 study in patients with familial partial lipodystrophy, or FPL. Akcea, an affiliate of Ionis focused on developing and commercializing drugs to treat patients with serious and rare diseases, will commercialize TEGSEDI and WAYLIVRA, if approved. Ionis’ patents provide strong and extensive protection for its drugs and technology. Additional information about Ionis is available at www.ionispharma.com.
 
6

Ionis’ Forward-looking Statement
 
This press release includes forward-looking statements regarding business, financial guidance and the therapeutic and commercial potential of SPINRAZA, TEGSEDI (inotersen), WAYLIVRA (volanesorsen) and Ionis’ technologies and products in development, including the business of Akcea Therapeutics, Inc., Ionis’ majority owned subsidiary. Any statement describing Ionis’ goals, expectations, financial or other projections, intentions or beliefs is a forward-looking statement and should be considered an at-risk statement. Such statements are subject to certain risks and uncertainties, particularly those inherent in the process of discovering, developing and commercializing drugs that are safe and effective for use as human therapeutics, and in the endeavor of building a business around such drugs. Ionis’ forward-looking statements also involve assumptions that, if they never materialize or prove correct, could cause its results to differ materially from those expressed or implied by such forward-looking statements. Although Ionis’ forward-looking statements reflect the good faith judgment of its management, these statements are based only on facts and factors currently known by Ionis. As a result, you are cautioned not to rely on these forward-looking statements. These and other risks concerning Ionis’ programs are described in additional detail in Ionis’ annual report on Form 10-K for the year ended December 31, 2017, which is on file with the SEC. Copies of this and other documents are available from the Company.

In this press release, unless the context requires otherwise, “Ionis,” “Company,” “we,” “our,” and “us” refers to Ionis Pharmaceuticals and its subsidiaries.

Ionis Pharmaceuticals is a trademark of Ionis Pharmaceuticals, Inc. Akcea Therapeutics is a trademark of Akcea Therapeutics, Inc. TEGSEDI is a trademark of Akcea Therapeutics, Inc. WAYLIVRA is a trademark of Akcea Therapeutics, Inc. SPINRAZA® is a registered trademark of Biogen.

Ionis Pharmaceuticals Investor Contact:
D. Wade Walke, Ph.D.
Vice President, Investor Relations
760-603-2741

Ionis Pharmaceuticals Media Contact:
Roslyn Patterson
Vice President, Corporate Communications
760-603-2681
 
7

IONIS PHARMACEUTICALS, INC.
SELECTED FINANCIAL INFORMATION
Condensed Consolidated Statements of Operations
(In Thousands, Except Per Share Data)

   
Three months ended,
March 31,
 
   
2018
   
2017
 
   
(as revised)
 
Revenue:
 
(unaudited)
 
Commercial revenue:
           
SPINRAZA royalties
 
$
41,081
   
$
5,211
 
Licensing and royalty revenue
   
942
     
2,590
 
Total commercial revenue
   
42,023
     
7,801
 
Research and development revenue under collaborative agreements
   
102,396
     
107,999
 
Total revenue
   
144,419
     
115,800
 
Expenses:
               
Research, development and patent expenses
   
104,067
     
82,638
 
Selling, general and administrative
   
43,653
     
13,677
 
Total operating expenses
   
147,720
     
96,315
 
Income (loss) from operations
   
(3,301
)
   
19,485
 
Other income (expense):
               
Investment income
   
3,610
     
2,280
 
Interest expense
   
(10,938
)
   
(11,363
)
Other expenses
   
(168
)
   
(1,438
)
Income (loss) before income tax expense
   
(10,797
)
   
8,964
 
                 
Income tax expense
   
(15
)
   
-
 
                 
Net income (loss)
 
$
(10,812
)
 
$
8,964
 
Net loss attributable to noncontrolling interest in Akcea Therapeutics, Inc.
 
$
9,392
     
-
 
Net income (loss) attributable to Ionis Pharmaceuticals, Inc. common stockholders
 
$
(1,420
)
 
$
8,964
 
                 
Basic net income (loss) per share
 
$
(0.01
)
 
$
0.07
 
Diluted net income (loss) per share
 
$
(0.01
)
 
$
0.07
 
Shares used in computing basic net income (loss) per share
   
125,330
     
122,861
 
Shares used in computing diluted net income (loss) per share
   
125,330
     
124,972
 
 
8

IONIS PHARMACEUTICALS, INC.
SELECTED FINANCIAL INFORMATION
Condensed Consolidating Statement of Operations
(In Thousands)
 
   
Three months ended,
March 31, 2018
(unaudited)
 
   
Ionis
   
Akcea
   
Eliminations
   
Ionis
Consolidated
 
Revenue:
     
Commercial revenue:
                       
SPINRAZA royalties
 
$
41,081
   
$
-
   
$
-
   
$
41,081
 
Licensing and royalty revenue
   
942
     
-
     
-
     
942
 
Total commercial revenue
   
42,023
     
-
     
-
     
42,023
 
Research and development revenue under collaborative agreements
   
85,288
     
17,108
     
-
     
102,396
 
Intercompany revenue
   
5,229
     
-
     
(5,229
)
   
-
 
Total revenue
   
132,540
     
17,108
     
(5,229
)
   
144,419
 
Expenses:
                               
Research, development and patent expenses
   
81,356
     
27,970
     
(5,259
)
   
104,067
 
Selling, general and administrative
   
24,188
     
19,465
     
-
     
43,653
 
Total operating expenses
   
105,544
     
47,435
     
(5,259
)
   
147,720
 
Income (loss) from operations
   
26,996
     
(30,327
)
   
30
     
(3,301
)
Other income (expense):
                               
Investment income
   
2,742
     
868
     
-
     
3,610
 
Interest expense
   
(10,938
)
   
-
     
-
     
(10,938
)
Other expenses
   
-
     
(168
)
   
-
     
(168
)
Income (loss) before income tax expense
   
18,800
     
(29,627
)
   
30
     
(10,797
)
                                 
Income tax expense
   
(15
)
   
-
     
-
     
(15
)
                                 
Net income (loss)
 
$
18,785
   
$
(29,627
)
 
$
30
   
$
(10,812
)
Net loss attributable to noncontrolling interest in Akcea Therapeutics, Inc.
 
$
-
   
$
-
   
$
9,392
   
$
9,392
 
Net income (loss) attributable to Ionis Pharmaceuticals, Inc. common stockholders
 
$
18,785
   
$
(29,627
)
 
$
9,422
   
$
(1,420
)
 
9

IONIS PHARMACEUTICALS, INC.
Reconciliation of GAAP to Pro Forma Basis:
Condensed Consolidated Operating Expenses, Income (Loss) From Operations, and Net Income (Loss)
(In Thousands)
 
   
Three months ended,
March 31,
 
   
2018
   
2017
 
   
(as revised)
 
   
(unaudited)
 
As reported operating expenses according to GAAP
 
$
147,720
   
$
96,315
 
Excluding compensation expense related to equity awards
   
(28,451
)
   
(20,912
)
Pro forma operating expenses
 
$
119,269
   
$
75,403
 
                 
As reported income (loss) from operations according to GAAP
 
$
(3,301
)
 
$
19,485
 
Excluding compensation expense related to equity awards
   
(28,451
)
   
(20,912
)
Pro forma income from operations
 
$
25,150
   
$
40,397
 
                 
As reported net income (loss) attributable to Ionis Pharmaceuticals, Inc. common stockholders according to GAAP
 
$
(1,420
)
 
$
8,964
 
Excluding compensation expense related to equity awards
   
(28,451
)
   
(20,912
)
Pro forma net income attributable to Ionis Pharmaceuticals, Inc. common stockholders
 
$
27,031
   
$
29,876
 

Reconciliation of GAAP to Pro Forma Basis
 
As illustrated in the Selected Financial Information in this press release, pro forma operating expenses, pro forma income (loss) from operations, and pro forma net income (loss) were adjusted from GAAP to exclude compensation expense related to equity awards, which are non-cash. Ionis has regularly reported non-GAAP measures for operating results as pro forma results. These measures are provided as supplementary information and are not a substitute for financial measures calculated in accordance with GAAP. Ionis reports these pro forma results to better enable financial statement users to assess and compare its historical performance and project its future operating results and cash flows. Further, the presentation of Ionis’ pro forma results is consistent with how Ionis’ management internally evaluates the performance of its operations.
 
10

IONIS PHARMACEUTICALS, INC.
Condensed Consolidated Balance Sheets
(In Thousands) (unaudited)

   
March 31,
2018
   
December 31,
2017
 
         
(as revised)
 
Assets:
           
Cash, cash equivalents and short-term investments
 
$
1,035,301
   
$
1,022,715
 
Contracts receivable
   
36,858
     
62,955
 
Other current assets
   
71,124
     
83,064
 
Property, plant and equipment, net
   
123,188
     
121,907
 
Other assets
   
33,089
     
32,133
 
Total assets
 
$
1,299,560
   
$
1,322,774
 
                 
Liabilities and stockholders’ equity:
               
Other current liabilities
 
$
92,516
   
$
118,276
 
Current portion of deferred contract revenue
   
120,127
     
125,336
 
1% convertible senior notes
   
541,635
     
533,111
 
Long-term obligations, less current portion
   
72,735
     
72,745
 
Long-term deferred contract revenue
   
85,446
     
108,026
 
Total Ionis stockholders’ equity
   
301,391
     
281,013
 
Noncontrolling interest in Akcea Therapeutics, Inc.
   
85,710
     
84,267
 
Total stockholders’ equity
   
387,101
     
365,280
 
Total liabilities and stockholders’ equity
 
$
1,299,560
   
$
1,322,774
 
 
11

IONIS PHARMACEUTICALS, INC.
Condensed Consolidating Balance Sheet
(In Thousands)
 
   
March 31, 2018
(unaudited)
 
   
Ionis
   
Akcea
   
Eliminations
   
Ionis
Consolidated
 
                         
Assets:
                       
Cash, cash equivalents and short-term investments
 
$
790,366
   
$
244,935
   
$
-
   
$
1,035,301
 
Contracts receivable
   
36,858
     
-
     
-
     
36,858
 
Receivable from Akcea Therapeutics, Inc.
   
27,737
     
-
     
(27,737
)
   
-
 
Other current assets
   
65,496
     
5,628
     
-
     
71,124
 
Property, plant and equipment, net
   
123,138
     
50
     
-
     
123,188
 
Other assets
 
305,449
     
1,853
     
(274,213
)
   
33,089
 
Total assets
 
$
1,349,044
   
$
252,466
   
$
(301,950
)
 
$
1,299,560
 
                                 
Liabilities and stockholders’ equity:
                               
Other current liabilities
 
$
70,823
   
$
49,431
   
$
(27,738
)
 
$
92,516
 
Current portion of deferred contract revenue
   
71,261
     
48,866
     
-
     
120,127
 
1% convertible senior notes
   
541,635
     
-
     
-
     
541,635
 
Long-term obligations, less current portion
   
72,725
     
10
     
-
     
72,735
 
Long-term deferred contract revenue
   
79,286
     
7,859
     
(1,699
)
   
85,446
 
Total stockholders’ equity before noncontrolling interest
   
513,314
     
146,300
     
(358,223
)
   
301,391
 
Noncontrolling interest in Akcea Therapeutics, Inc.
   
-
     
-
     
85,710
     
85,710
 
Total stockholders’ equity
   
513,314
     
146,300
     
(272,513
)
   
387,101
 
Total liabilities and stockholders’ equity
 
$
1,349,044
   
$
252,466
   
$
(301,950
)
 
$
1,299,560
 
 
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SPINRAZA Q1 2017 – Q1 2018 Patient Dynamics
 
 

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